Devin Dinwiddie

Devin Dinwiddie

Bioinformatician at TGEN

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About Me

I am currently working as a Bioinformatician at the Translational Genomics Research Institute. I enjoy the challenges of programming novel approaches to analyze data generated from next generation sequencing technologies. I am also a classically trained biologist, so I am not afraid to get behind the bench or out in the field and get my hands dirty. In my spare time if I am not outside exploring with my dog, you can find me reading books or watching a good movie.

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Publications

• Donovan, Drake A., Crandall, Johnathan G., Truong, Vi N., Vaaler, Abigail L., Bailey, Thomas B., Dinwiddie Devin, McKnight, Laura E., and McKnight, Jeffrey N. "Basis of Specificity for a Conserved and Promiscuous Chromatin Remodeling Protein." eLife (2021). Read Article

• Kurhanewicz, Nicole A., Dinwiddie Devin, Bush, Zachary D., and Libuda, Diana E. "Elevated Temperatures Cause Transposon-Associated DNA Damage in C. elegans Spermatocytes." Current Biology (2020). Read Article

• Donovan, Drake A., Crandall, Johnathan G., Banks, Orion G.B., Jensvold, Zena D., Truong, Vi N., Dinwiddie Devin, McKnight, Laura E., and McKnight, Jeffrey N. "Engineered Chromatin Remodeling Proteins for Precise Nucleosome Positioning." Cell Reports 29, no. 8 (2019): 2520-2535. Read Article

• Hoch, Jessica M., Rhodes, Matthew E., Shek Katherine, Dinwiddie Devin, Hiebert, Terra C., Gill Aman, Salazar Estrada, Andres E., Griffin, Kevin L., Palmer, Matthew I., and McGuire, Krista L. "Soil microbial assemblages are linked to plant community composition and contribute to ecosystem services on urban green roofs." Frontiers in Ecology and Evolution 7 (2019): 198. Read Article

• Brodsky, Olivia L., Shek, Katherine L., Dinwiddie Devin, Bruner, Sarah G., Gill, Aman S., Hoch, Jessica M., Palmer, Matthew I., and McGuire, Krista L. "Microbial communities in bioswale soils and their relationships to soil properties, plant species, and plant physiology." Frontiers in Microbiology 10 (2019). Read Article

Examples Of My Work


pcr_dup

Profiling Soil Metagenomes Using HUMAnN2 open source

A step by step guide for analyzing metagenomic sequencenses using HUMAnN2 and MetaPhlan.

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Motif_Mark

Motif Mark open source

A program to search intronic and exonic sequences for motifs and plot gene sequence introns and exons with color coded motifs and postion information

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differential expression

Differential Expression with R

Example R script for analyzing differential gene expression using EdgeR and limma Voom

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